Get TSS or TSR GRanges.

Extract the TSS or TSR GRanges from the 'experiment' slot.

get_granges(experiment, data_type = c("tss", "tsr"), samples = "all")

Arguments

experiment	TSRexploreR object.
data_type	Get either TSS ('tss') or TSR ('tsr') GRanges.
samples	A vector of sample names to analyze.

Value

List of TSS or TSR GRanges.

See also

get_counts to get TSS or TSR counts data.frame.

Examples

data(TSSs_reduced)

exp <- tsr_explorer(TSSs_reduced)

gr <- get_granges(exp)