get_assembly.Rd
Extract the genome assembly.
get_assembly(experiment)
experiment | TSRexploreR object. |
---|
Either BSgenome or FaFile depending on original source of assembly.
get_annotation
to get genome annotation.
assembly <- system.file("extdata", "S288C_Assembly.fasta", package="TSRexploreR") exp <- tsr_explorer(genome_assembly=assembly) a <- get_assembly(exp)